Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919010.1_cds_XP_016468301.1_60956
CDS Infomation

[gene=LOC107790855] [db_xref=GeneID:107790855] [protein=pentatricopeptide repeat-containing protein At2g17033-like] [protein_id=XP_016468301.1] [location=complement(join(123346..124440,125235..125519))] [gbkey=CDS]
Sequence

ATGATCGGAAGTATCCTACTTCCGGCGCCGGTGCCGCTGCCAAGTCACCGGATAAGCCTC
CGGAACCGCCACTCACAGTCAGGTAGTCCTCGGTGCTCGCTGAGCAAACAAGGCCACCGC
TTTATTTCCACCCTTATCGCCACCGACTCCGACGATATATCCGCTACTCACCGCTTACTC
CGCAAATTCGTGGCCTCATCTTCAAAACACGTCGCTCTCAGTACTCTATCTCACCTCTTA
TCGCCTACTACCTCTCACCTTCGCCTTTCTTCTCTTGCCCTTCCCTTGTATTTGGAAATC
AGTGAAGCGTCATGGTTTGATTGGAATTCGAAGCTAGTGGCTGACTTGGTTGCTTTGCTT
TACAAGCTAGAGAGATTTGATGAAGCTGAAACCCTAGTTACTGAAACGGTTTCTAAATTA
GGAGGCCGAGAACGAGATTTGTGTAGTTTCTACTCTCAGTTGATCCATTCGCAATCTAAG
CACAAATCGGAAAAAGGTGTTTTGGATTTTTGCACAAAATTGAAGTTGTTTCTCTCATGT
TCCTCGTCTGTTTATCTGAAGCAACAAGGGTACGCCTCGATGGTGGATGCATTTTGTTCT
ATTGGATTACCGCGTGACGCTGAGGAATTGATTGAAGAGATGAAGGAATTAGGATTGAAA
TTATCAAAGTTTGAATTTAGAGCTCTAGTTTATTCATATGGTAAATCAGGATTCTTTAGT
GATATGAAAAGGATTGTAGGTCAAATGGAGAGTATGGGACTTCAATTAGATACAGTTGGC
GCAAATATGGTGCTTAATTCATTTGGATCTCAGTACGAGCTTTCAGAAATGGTTTCGTGG
CTCCAAAAAATGGATGTTTCAGGTGTTCCGTTTTCTATTAGGACTTACAATTCGGTGCTG
AATTCGTGCCCCACGATTAGTCTTTTGCTGCAAGATCCGAAGAGTGTTCCTCTTTCTCTT
GAAGAGTTACTGGCGAATTTGAATGAGAATGAAGCGAGTTTGGTGAAGATACTGGTTGGA
TCATCGGTTTTGGAGGAGACAATGCAGTGGAATCCTTCGGAGTTGAAGCTGGACTTGCAT
GGGATGCATTTGAGCTCTGCTTATGTGATCATATTACAATGGTTTCATCAGCTTCAGTGC
AAGCTTGTTGCTGAAAATCGCGTTCTTCCTGCTGAAATCACAGTGGTATGTGGAGCGGGA
AAACACAGTGTTGTTAGAGGAGAATCCCCAGTGAAAGGGTTGATCAAGGAATTACTTCTA
CGGGTAGGATGTCCACTCAGGATTGATAGGAAGAACATTGGATGTTTCATTGGTAAAGGA
AAAAGTTTCATGGAGTGGTTATCAAACAACAATACCACTATACATGAAAGGATATCCTGA

Peptide Sequence

PEP ID

XP_016468301.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g17033-like [Nicotiana tabacum]
Sequence

MIGSILLPAPVPLPSHRISLRNRHSQSGSPRCSLSKQGHRFISTLIATDSDDISATHRLL
RKFVASSSKHVALSTLSHLLSPTTSHLRLSSLALPLYLEISEASWFDWNSKLVADLVALL
YKLERFDEAETLVTETVSKLGGRERDLCSFYSQLIHSQSKHKSEKGVLDFCTKLKLFLSC
SSSVYLKQQGYASMVDAFCSIGLPRDAEELIEEMKELGLKLSKFEFRALVYSYGKSGFFS
DMKRIVGQMESMGLQLDTVGANMVLNSFGSQYELSEMVSWLQKMDVSGVPFSIRTYNSVL
NSCPTISLLLQDPKSVPLSLEELLANLNENEASLVKILVGSSVLEETMQWNPSELKLDLH
GMHLSSAYVIILQWFHQLQCKLVAENRVLPAEITVVCGAGKHSVVRGESPVKGLIKELLL
RVGCPLRIDRKNIGCFIGKGKSFMEWLSNNNTTIHERIS

Transcript Sequence

Gene sequence data has not been registered.